System Requirements

Hardware requirements

tHMM package requires only a standard computer with enough RAM to support the in-memory operations.

Software requirements

OS requirements

This package is supported for macOS and Linux. The package has been tested on the following systems: - macOS: Mojave (10.14.1) - Linux: Ubuntu 20.04

Python dependencies

tHMM requires virtualenv. All other required packages can then be installed using make venv to establish a virtual environment. The Python packages that will be installed are listed in requirements.txt, and can be directly installed using pip install -r requirements.txt.